Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927090.1_cds_XP_016474979.1_66952
CDS Infomation

[gene=LOC107796699] [db_xref=GeneID:107796699] [protein=3-isopropylmalate dehydratase large subunit-like] [protein_id=XP_016474979.1] [location=join(5332..5374,5961..6098,7749..7810,8886..9056,10085..10237,10342..10410,10502..10618,11157..11285,11387..11464,11542..11625)] [gbkey=CDS]
Sequence

ATGAGTTCTAGTAAAATATTTGGTCCAACTAGGGGTGTTCATGCCTCCAAAACTGCGCCC
ATTTTTTCTTTAACAAAGAGCTTTATATCACTGCCCAAAAAGAAACTGAAGCTAATTCAT
ACTATCAACAATGGCGTCTTCAGCTGTAGCTTCAAGCTCCACACTTCATGTCATCAACAA
GGTGGTTTTCAAGAAAATATTTTCTGTCAGCAGACTGAACGCAAACCAGCTACCACTGGC
TCAGTTAAGACGGGGATGACTATGACCGAGAAGATATTAGCTAGGGCTTCTGACAAGCCT
GAAGTTACTCCTGGTGATAATGTGTGGGTCAATGTTGATGTTCTGATGACACATGATATT
GGTGGCCCGGCCTCTTTTGGAGTTTTCAAAGAACAATTTGGACAGAAAGCTAAGGTTTGG
AATCCTGAGAAGATTGTCATCATACCTGATCACTACATATTCACGGCTGATGAGCGAGCA
AACCGTAATGTGGATGTGTTGAGGGACTACTGCAGTGAGCAAAATATTAAGTACTTCTAT
GACATTAAAAATCGTGGGAACTTCGGGGCTAATCCAGATTACAAGGGCGTCTGCCACGTT
GCTCTTGCCCAAGAAGGTCACTGCAGACCTGGAGAGGTTTTGCTGGGAACAGACTCTCAT
ACATGTACTGCCGGAGCGTTTGGGCAGTTTGCTACCGGAATTGGCACTACAGGTGCAGGT
TTTGTGTTGGGTACTGGAAAGCTTTTGCTCAAGGTGCCTCCAACTTTGAGATTTGTCATG
GATGGCGAAATGCCAAGTTACTTGCTAGCTAAGGATTTGATTTTGCAAATAAGTACTGTT
ATATATACTCTGTGGCTCATTTCTGTCAGTTGGATGTCTCATATTATTGGTGAAATATCT
GTGGCTGGTGCTACATACAAAACAATGGAGTTTGTTGGCACCACAGTTGAATGTTTGAGC
ATGGAAGAAAGAATGACATTATGCAACATGGTTGTTGAAGCTGATGGAAAGAATGGTGTC
ATCCCAGCCGATAAAACAACTTAA

Peptide Sequence

PEP ID

XP_016474979.1
PEP Infomation

PREDICTED: 3-isopropylmalate dehydratase large subunit-like [Nicotiana tabacum]
Sequence

MSSSKIFGPTRGVHASKTAPIFSLTKSFISLPKKKLKLIHTINNGVFSCSFKLHTSCHQQ
GGFQENIFCQQTERKPATTGSVKTGMTMTEKILARASDKPEVTPGDNVWVNVDVLMTHDI
GGPASFGVFKEQFGQKAKVWNPEKIVIIPDHYIFTADERANRNVDVLRDYCSEQNIKYFY
DIKNRGNFGANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGTTGAG
FVLGTGKLLLKVPPTLRFVMDGEMPSYLLAKDLILQISTVIYTLWLISVSWMSHIIGEIS
VAGATYKTMEFVGTTVECLSMEERMTLCNMVVEADGKNGVIPADKTT

Transcript Sequence

Gene sequence data has not been registered.